1 00:00:07,320 --> 00:00:08,530 PROFESSOR: Hello and welcome to the 2 00:00:08,530 --> 00:00:10,660 help session on pedigrees. 3 00:00:10,660 --> 00:00:13,560 Today, we will be working out a problem together. 4 00:00:13,560 --> 00:00:17,050 If you have not yet had a chance to work it on your own, 5 00:00:17,050 --> 00:00:19,600 please do so now, and return to this video 6 00:00:19,600 --> 00:00:20,850 when you are done. 7 00:00:29,390 --> 00:00:32,380 Now that you've had a chance to look at this problem, let's 8 00:00:32,380 --> 00:00:33,780 work it out together. 9 00:00:33,780 --> 00:00:36,780 The first part of this question asks, what is the 10 00:00:36,780 --> 00:00:40,930 mode of inheritance that is observed in this pedigree? 11 00:00:40,930 --> 00:00:43,730 So, we know that there are two main types of modes of 12 00:00:43,730 --> 00:00:44,800 inheritance. 13 00:00:44,800 --> 00:00:47,780 It can either be dominant or recessive. 14 00:00:47,780 --> 00:00:51,030 And from there it can either be autosomal or X-linked. 15 00:00:53,770 --> 00:00:57,720 If a disease follows a dominant inheritance pattern, 16 00:00:57,720 --> 00:01:00,990 generally, it must be present in every generation. 17 00:01:00,990 --> 00:01:04,230 So here we notice that the disease is present in the 18 00:01:04,230 --> 00:01:07,660 first generation, but it's not present in anyone in the 19 00:01:07,660 --> 00:01:09,430 second generation. 20 00:01:09,430 --> 00:01:13,500 However, then it reappears in the third generation. 21 00:01:13,500 --> 00:01:17,170 This suggests that the disease is recessive. 22 00:01:27,540 --> 00:01:30,950 So now, do we think this disease is 23 00:01:30,950 --> 00:01:33,910 autosomal or is it X-linked? 24 00:01:33,910 --> 00:01:37,010 So we look at the pedigree again, and upon closer 25 00:01:37,010 --> 00:01:41,000 inspection, we notice that the affected 26 00:01:41,000 --> 00:01:44,040 individuals are only males. 27 00:01:44,040 --> 00:01:46,620 This is a key characteristic of an 28 00:01:46,620 --> 00:01:49,370 X-linked recessive disease. 29 00:01:49,370 --> 00:01:52,990 However, we're also given more information that tells us that 30 00:01:52,990 --> 00:01:56,460 this individual here does not carry an allele associated 31 00:01:56,460 --> 00:01:59,370 with the affected phenotype. 32 00:01:59,370 --> 00:02:04,100 This rules out the possibility that this disease could be an 33 00:02:04,100 --> 00:02:06,450 autosomal recessive disease. 34 00:02:06,450 --> 00:02:07,890 Thus, the most likely mode of 35 00:02:07,890 --> 00:02:09,795 inheritance is X-linked recessive. 36 00:02:17,630 --> 00:02:21,400 Great, so moving on to the second part of this problem, 37 00:02:21,400 --> 00:02:24,480 we are asked to determine the genotypes of individuals 38 00:02:24,480 --> 00:02:27,280 number one and number three. 39 00:02:27,280 --> 00:02:31,940 So, if we look at this pedigree, we know individual 40 00:02:31,940 --> 00:02:37,400 one is female and not affected by the disease. 41 00:02:37,400 --> 00:02:44,860 Female individuals contain two X chromosomes, and since she 42 00:02:44,860 --> 00:02:50,345 is not affected she must contain at least one large R. 43 00:02:50,345 --> 00:02:53,170 So we'll call the allele associated with the 44 00:02:53,170 --> 00:02:54,420 disease small r. 45 00:02:59,850 --> 00:03:03,950 We do not yet know what her second X chromosome could be. 46 00:03:03,950 --> 00:03:09,050 It could be either another large R or it 47 00:03:09,050 --> 00:03:10,100 could be a small r. 48 00:03:10,100 --> 00:03:13,140 And she also would still not be affected by the disease. 49 00:03:21,230 --> 00:03:23,930 This male right here is affected by the disease. 50 00:03:23,930 --> 00:03:26,410 So he must have an X with a small r. 51 00:03:30,480 --> 00:03:33,320 Remember that males have one X chromosome and one Y 52 00:03:33,320 --> 00:03:35,650 chromosome. 53 00:03:35,650 --> 00:03:39,250 So now, making our way down to individual number three. 54 00:03:39,250 --> 00:03:43,120 Individual number three does not have the disease and is 55 00:03:43,120 --> 00:03:45,520 female, so again, must have two X chromosomes. 56 00:03:51,270 --> 00:03:54,060 One of the X chromosomes must come from her father and the 57 00:03:54,060 --> 00:03:55,940 other from her mother. 58 00:03:55,940 --> 00:03:59,070 The only X chromosome that her father can pass along to her 59 00:03:59,070 --> 00:04:02,940 is X small r. 60 00:04:02,940 --> 00:04:05,930 In order for her to not be affected with the disease, her 61 00:04:05,930 --> 00:04:13,480 other X chromosome must have a large R. 62 00:04:13,480 --> 00:04:16,860 She was able to get this genotype with her mother 63 00:04:16,860 --> 00:04:20,420 having either of these two genotypes. 64 00:04:20,420 --> 00:04:22,780 To make sure that both of these genotypes are possible 65 00:04:22,780 --> 00:04:27,320 for this mother, we need to examine her other children. 66 00:04:27,320 --> 00:04:29,300 Her son here is unaffected. 67 00:04:29,300 --> 00:04:39,540 So his genotype must have been X large R, Y. It's possible 68 00:04:39,540 --> 00:04:42,640 for him to get this genotype when the mother has either of 69 00:04:42,640 --> 00:04:45,560 these two genotypes. 70 00:04:45,560 --> 00:04:49,635 Similarly, this daughter could be unaffected just as this 71 00:04:49,635 --> 00:04:51,000 daughter was unaffected. 72 00:04:51,000 --> 00:04:53,970 So the mother can have either of these two genotypes. 73 00:04:53,970 --> 00:04:56,770 And we're unable to rule out one of them. 74 00:04:56,770 --> 00:04:59,620 So let me just write up the answer over here. 75 00:05:19,020 --> 00:05:21,030 All right, so far, so good. 76 00:05:21,030 --> 00:05:24,060 Next, we're asked to calculate the probability that 77 00:05:24,060 --> 00:05:27,720 individual A is affected. 78 00:05:27,720 --> 00:05:32,960 Individual A is over here at the bottom of the pedigree. 79 00:05:32,960 --> 00:05:37,520 In order for individual A to be affected, she must have the 80 00:05:37,520 --> 00:05:38,770 following genotype. 81 00:05:45,380 --> 00:05:48,460 The only way for her to get two little r's is for her to 82 00:05:48,460 --> 00:05:51,100 get one from her father and one from her mother. 83 00:05:51,100 --> 00:05:53,970 We know this is possible because her father is affected 84 00:05:53,970 --> 00:05:59,970 with the following genotype of Y, X small r. 85 00:05:59,970 --> 00:06:01,790 Her mother is not affected. 86 00:06:01,790 --> 00:06:05,840 So for her to get this small r, her mother must be a 87 00:06:05,840 --> 00:06:10,100 carrier for the disease, and have the genotype X 88 00:06:10,100 --> 00:06:14,860 large R, X small r. 89 00:06:14,860 --> 00:06:19,940 So in order to determine the probability that A is affected 90 00:06:19,940 --> 00:06:23,850 with both X small r's, we must also know the probability that 91 00:06:23,850 --> 00:06:26,570 her mother was a carrier for the disease. 92 00:06:26,570 --> 00:06:30,190 Let's call her mother individual C. 93 00:06:30,190 --> 00:06:33,820 So, we know the genotypes of her parents. 94 00:06:33,820 --> 00:06:35,410 Her mother was a carrier. 95 00:06:35,410 --> 00:06:38,190 And her father did not have the disease, so his genotype 96 00:06:38,190 --> 00:06:45,420 was Y with X large R. So to calculate the probability that 97 00:06:45,420 --> 00:06:48,680 individual C is a carrier for the disease, let's go back 98 00:06:48,680 --> 00:06:50,731 over here and draw out a Punnett square. 99 00:07:00,240 --> 00:07:02,410 On one side, we're going to write the genotype of her 100 00:07:02,410 --> 00:07:09,080 father, which was Y because he's a male. 101 00:07:09,080 --> 00:07:13,210 And then, he was not affected by the disease, so it was X 102 00:07:13,210 --> 00:07:19,410 with a large R. Her mother was a carrier. 103 00:07:19,410 --> 00:07:24,330 So she had one copy that was X large R, and one copy that was 104 00:07:24,330 --> 00:07:26,770 x little r. 105 00:07:26,770 --> 00:07:30,630 So next, we want to know the probability 106 00:07:30,630 --> 00:07:33,270 that she was a carrier. 107 00:07:33,270 --> 00:07:35,990 The only ways you can get females is by looking at this 108 00:07:35,990 --> 00:07:37,240 top row here. 109 00:07:44,190 --> 00:07:47,170 So, for now, we're going to ignore the bottom row. 110 00:07:47,170 --> 00:07:51,090 Of the two possible ways to generate a female, only one of 111 00:07:51,090 --> 00:07:52,960 them is a carrier. 112 00:07:52,960 --> 00:07:57,260 So there's a 50% chance that a female will be a carrier. 113 00:08:05,680 --> 00:08:09,660 So this is a 50% chance that individual C is a carrier, 114 00:08:09,660 --> 00:08:14,330 which we will denote with this half filled in circle. 115 00:08:14,330 --> 00:08:17,530 All right, so now that we know the probability that C was a 116 00:08:17,530 --> 00:08:20,610 carrier, we need to know the probability that her progeny, 117 00:08:20,610 --> 00:08:23,290 A, was affected with the disease. 118 00:08:23,290 --> 00:08:28,570 Again, looking back over here, her progeny needs to inherit 119 00:08:28,570 --> 00:08:31,030 the X small r from the mother and the X 120 00:08:31,030 --> 00:08:33,150 small r from the father. 121 00:08:33,150 --> 00:08:36,130 So, once again, we can draw a Punnett square to better 122 00:08:36,130 --> 00:08:37,380 understand this. 123 00:08:46,840 --> 00:08:49,700 Individual A's father was indeed 124 00:08:49,700 --> 00:08:51,340 affected by the disease. 125 00:08:51,340 --> 00:08:56,960 So his genotype was X small r and Y. Her mother, we just 126 00:08:56,960 --> 00:09:01,730 calculated the probability of her being a carrier, so she is 127 00:09:01,730 --> 00:09:04,690 X large R, X small r. 128 00:09:07,500 --> 00:09:10,550 Now, we're looking at individual A, who is a female, 129 00:09:10,550 --> 00:09:12,500 so again, we can ignore the bottom row because 130 00:09:12,500 --> 00:09:14,760 this will be males. 131 00:09:14,760 --> 00:09:16,655 Here are the progeny which are female. 132 00:09:22,560 --> 00:09:27,150 Of the two possibilities, only the one on the right, X small 133 00:09:27,150 --> 00:09:30,900 r, X small r is affected by the disease. 134 00:09:30,900 --> 00:09:35,130 So there is a 50% chance that A will be affected by the 135 00:09:35,130 --> 00:09:38,220 disease given that her mother is a carrier of the disease. 136 00:09:43,950 --> 00:09:48,330 Now to finish up this part of the problem, we need to 137 00:09:48,330 --> 00:09:50,760 multiply these two probabilities together because 138 00:09:50,760 --> 00:09:53,280 we're looking at the probability that C is a 139 00:09:53,280 --> 00:10:00,930 carrier, and the probability that A is 140 00:10:00,930 --> 00:10:02,180 affected with the disease. 141 00:10:07,400 --> 00:10:11,170 This gives us our answer of one fourth. 142 00:10:11,170 --> 00:10:14,310 All right, so, moving on to the last part of the problem. 143 00:10:14,310 --> 00:10:17,590 We need to calculate the probability that B is affected 144 00:10:17,590 --> 00:10:18,910 with the disease. 145 00:10:18,910 --> 00:10:21,840 So this isn't that hard now that we've drawn out all of 146 00:10:21,840 --> 00:10:23,820 these Punnett squares already. 147 00:10:23,820 --> 00:10:29,700 So, let's take a look back at our pedigree over here. 148 00:10:29,700 --> 00:10:33,520 If B is going to be affected with the disease, he must have 149 00:10:33,520 --> 00:10:38,760 the genotype Y, X with a small r. 150 00:10:38,760 --> 00:10:43,450 He gets the Y from his father and he must get this X with a 151 00:10:43,450 --> 00:10:45,770 small r from his mother. 152 00:10:45,770 --> 00:10:49,600 So again, we need the mother, C, to be a carrier. 153 00:10:49,600 --> 00:10:54,000 So let's go back to our Punnett squares over here. 154 00:10:54,000 --> 00:10:56,510 We know that there is a 50% chance that 155 00:10:56,510 --> 00:10:59,310 individual C is a carrier. 156 00:10:59,310 --> 00:11:03,220 Now we need to look at individual B being affected by 157 00:11:03,220 --> 00:11:03,810 the disease. 158 00:11:03,810 --> 00:11:06,090 So we can go ahead and fill in the bottom part of this 159 00:11:06,090 --> 00:11:07,340 Punnett square. 160 00:11:14,010 --> 00:11:18,910 So of these two males, that are possible, only one of them 161 00:11:18,910 --> 00:11:20,620 is affected with the disease. 162 00:11:20,620 --> 00:11:24,510 So again, there is a 50% probability that that child 163 00:11:24,510 --> 00:11:25,760 will be affected with the disease. 164 00:11:30,560 --> 00:11:32,340 Again, we are going to multiply these 165 00:11:32,340 --> 00:11:33,620 probabilities together. 166 00:11:33,620 --> 00:11:38,270 So the probability that the mother is a carrier, and that 167 00:11:38,270 --> 00:11:46,470 the son is affected with the disease, gives us one quarter. 168 00:11:46,470 --> 00:11:49,270 That concludes our problem on pedigrees. 169 00:11:49,270 --> 00:11:50,520 Thank you for joining us.